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Covid Italy, Omicron 2 at 94%: also present sub-variants 4 and 5

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“In Italy, on May 3, the Omicron variant” of Covid-19 “had an estimated prevalence of 100%, with the BA.2 sub-variant” almost 94% “and the presence of some cases of the BA.4 sub-variants and BA.5 “. This is the photograph taken by the flash survey conducted by the Higher Institute of Health and the Ministry of Health, together with the regional laboratories and the Bruno Kessler Foundation. For the rapid investigation, the laboratories of regions and autonomous provinces were asked to select subsamples of Covid-positive cases and to sequence the genome of the virus. The sample requested was chosen by Regions / Pa at random from among the positive samples, ensuring a certain geographical representativeness and, if possible, for different age groups. All Regions / Pa took part in the survey, for a total of 112 laboratories that sequenced 1,799 samples. These are the estimated prevalences: BA.1 is 3.5% (range 0-12.9%); BA.2 at 93.8% (65.6-100%); BA.3 below 0.1% (0-0.9%); BA.4 almost 0.5% (0-4%); BA.5 at 0.4% (0-5.6%). Also present were some recombinants of Omicron 1 and 2: XJ at 0.66%; XM at 0.59%; XN at 0.15%; XQ and XT below 0.1%. The case of Sardinia stands out, where BA.2 marks the minimum record (65.57%) and where two Omicron 1 and 2 recombinants seem to run: the XJ and XM mix mutants; both well above 10%, at 19.67% and 14.75% respectively. The data comes from the latest flash survey conducted on May 3 by the Higher Institute of Health and the Ministry of Health, together with the regional laboratories and the Bruno Kessler Foundation. In the map of the ‘park variants’ of Sars-CoV-2 circulating in the Peninsula, Omicron 2 is 100% in 5 autonomous regions / provinces (Basilicata, Molise, Bolzano, Trento and Valle d’Aosta). Omicron sub-variants 4 and 5 (BA.4 and BA.5), in the spotlight for a fifth wave of Covid in South Africa, are present in 7 regions (4 and 3 respectively). BA.4 reaches a peak of 4.02% in Emilia Romagna, followed by Calabria (2.86%), Tuscany (1.03%) and Lombardy (0.96%); BA.5 is almost 6% in Umbria (5.56%), followed by Puglia (3.23%) and Lazio (0.92%).

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